usage: __main__.py [-h] [--processes NBR] [-v [{DEBUG,INFO,WARNING}]] [-f]
in_sh out_sh
{descoteaux07,tournier07,descoteaux07_legacy,tournier07_legacy}
{descoteaux07,tournier07,descoteaux07_legacy,tournier07_legacy}
Convert a SH file between the two of the following basis choices:
'descoteaux07', 'descoteaux07_legacy', 'tournier07' or 'tournier07_legacy'.
Using the sh_basis argument, both the input and the output SH bases must be
given, in the order. For more information about the bases, see
https://docs.dipy.org/stable/theory/sh_basis.html.
Formerly: scil_convert_sh_basis.py
positional arguments:
in_sh Input SH filename. (nii or nii.gz)
out_sh Output SH filename. (nii or nii.gz)
{descoteaux07,tournier07,descoteaux07_legacy,tournier07_legacy}
Spherical harmonics basis used for the SH coefficients.
Both the input and output bases are required, in that order.
Must be either descoteaux07', 'tournier07',
'descoteaux07_legacy' or 'tournier07_legacy' [['descoteaux07_legacy', 'tournier07']]:
'descoteaux07' : SH basis from the Descoteaux et al.
MRM 2007 paper
'tournier07' : SH basis from the new Tournier et al.
NeuroImage 2019 paper, as in MRtrix 3.
'descoteaux07_legacy': SH basis from the legacy Dipy implementation
of the Descoteaux et al. MRM 2007 paper
'tournier07_legacy' : SH basis from the legacy Tournier et al.
NeuroImage 2007 paper.
options:
-h, --help show this help message and exit
--processes NBR Number of sub-processes to start.
Default: [1]
-v [{DEBUG,INFO,WARNING}]
Produces verbose output depending on the provided level.
Default level is warning, default when using -v is info.
-f Force overwriting of the output files.