usage: __main__.py [-h] [--out_dir OUT_DIR] [--out_prefix OUT_PREFIX]
[-r min max min max] [--background BACKGROUND]
[-v [{DEBUG,INFO,WARNING}]] [-f]
in_labels
Split a label image into multiple images where the name of the output images
is the id of the label (ex. 35.nii.gz, 36.nii.gz, ...). If the --range option
is not provided, all labels of the image are extracted. The label 0 is
considered as the background and is ignored.
IMPORTANT: your label image must be of an integer type.
Formerly: scil_split_volume_by_ids.py
positional arguments:
in_labels Path of the input label file, in a format supported by Nibabel.
options:
-h, --help show this help message and exit
--out_dir OUT_DIR Put all ouptput images in a specific directory.
--out_prefix OUT_PREFIX
Prefix to be used for each output image.
-r min max min max, --range min max min max
Specifies a subset of labels to split, formatted as min max. Ex: -r 3 5 will give files _3, _4, _5.
--background BACKGROUND
Background value. Will not be saved as a separate label. Default: 0.
-v [{DEBUG,INFO,WARNING}]
Produces verbose output depending on the provided level.
Default level is warning, default when using -v is info.
-f Force overwriting of the output files.