All modules for which code is available
- scilpy.connectivity.connectivity
- scilpy.connectivity.matrix_tools
- scilpy.denoise.asym_filtering
- scilpy.dwi.operations
- scilpy.dwi.utils
- scilpy.gpuparallel.opencl_utils
- scilpy.gradients.bvec_bval_tools
- scilpy.gradients.gen_gradient_sampling
- scilpy.gradients.optimize_gradient_sampling
- scilpy.gradients.utils
- scilpy.image.labels
- scilpy.image.reslice
- scilpy.image.utils
- scilpy.image.volume_b0_synthesis
- scilpy.image.volume_math
- scilpy.image.volume_metrics
- scilpy.image.volume_operations
- scilpy.image.volume_space_management
- scilpy.io.btensor
- scilpy.io.deprecator
- scilpy.io.dvc
- scilpy.io.fetcher
- scilpy.io.gradients
- scilpy.io.hdf5
- scilpy.io.image
- scilpy.io.mti
- scilpy.io.streamlines
- scilpy.io.tensor
- scilpy.io.utils
- scilpy.io.varian_fdf
- scilpy.maths.utils
- scilpy.ml.bundleparc.encodings
- scilpy.ml.bundleparc.labels
- scilpy.ml.bundleparc.predict
- scilpy.ml.bundleparc.utils
- scilpy.preprocessing.distortion_correction
- scilpy.reconst.aodf
- scilpy.reconst.bingham
- scilpy.reconst.divide
- scilpy.reconst.fiber_coherence
- scilpy.reconst.fodf
- scilpy.reconst.frf
- scilpy.reconst.mti
- scilpy.reconst.sh
- scilpy.reconst.utils
- scilpy.segment.bundleseg
- scilpy.segment.streamlines
- scilpy.segment.tractogram_from_roi
- scilpy.segment.voting_scheme
- scilpy.stats.matrix_stats
- scilpy.stats.stats
- scilpy.stats.utils
- scilpy.surfaces.surface_operations
- scilpy.surfaces.utils
- scilpy.tracking.fibertube_utils
- scilpy.tracking.propagator
- scilpy.tracking.rap
- scilpy.tracking.seed
- scilpy.tracking.tracker
- scilpy.tracking.utils
- scilpy.tractanalysis.afd_along_streamlines
- scilpy.tractanalysis.bingham_metric_along_streamlines
- scilpy.tractanalysis.bundle_operations
- scilpy.tractanalysis.connectivity_segmentation
- scilpy.tractanalysis.distance_to_centroid
- scilpy.tractanalysis.fixel_density
- scilpy.tractanalysis.json_utils
- scilpy.tractanalysis.mrds_along_streamlines
- scilpy.tractanalysis.multi_bundle_operations
- scilpy.tractanalysis.reproducibility_measures
- scilpy.tractanalysis.scoring
- scilpy.tractanalysis.streamlines_metrics
- scilpy.tractanalysis.todi
- scilpy.tractanalysis.todi_util
- scilpy.tractanalysis.voxel_boundary_intersection
- scilpy.tractograms.dps_and_dpp_management
- scilpy.tractograms.intersection_finder
- scilpy.tractograms.lazy_tractogram_operations
- scilpy.tractograms.streamline_and_mask_operations
- scilpy.tractograms.streamline_operations
- scilpy.tractograms.tractogram_operations
- scilpy.tractograms.uncompress
- scilpy.utils.filenames
- scilpy.utils.metrics_tools
- scilpy.utils.scilpy_bot
- scilpy.utils.spatial
- scilpy.viz.color
- scilpy.viz.gradients
- scilpy.viz.plot
- scilpy.viz.screenshot
- scilpy.viz.slice
- scilpy.viz.utils