.. _scil_dwi_concatenate:

scil_dwi_concatenate
====================

::

	usage: __main__.py [-h] [--in_dwis IN_DWIS [IN_DWIS ...]]
	                   [--in_bvals IN_BVALS [IN_BVALS ...]]
	                   [--in_bvecs IN_BVECS [IN_BVECS ...]]
	                   [--data_type DATA_TYPE] [-v [{DEBUG,INFO,WARNING,ERROR}]]
	                   [-f]
	                   out_dwi out_bval out_bvec
	
	Concatenate DWI, bval and bvecs together. File must be specified in matching
	order. Default data type will be the same as the first input DWI.
	
	positional arguments:
	  out_dwi               The name of the output DWI file.
	  out_bval              The name of the output b-values file (.bval).
	  out_bvec              The name of the output b-vectors file (.bvec).
	
	options:
	  -h, --help            show this help message and exit
	  --in_dwis IN_DWIS [IN_DWIS ...]
	                        The DWI file (.nii) to concatenate.
	  --in_bvals IN_BVALS [IN_BVALS ...]
	                        The b-values files in FSL format (.bval).
	  --in_bvecs IN_BVECS [IN_BVECS ...]
	                        The b-vectors files in FSL format (.bvec).
	  --data_type DATA_TYPE
	                        Data type of the output image. Use the format: uint8, int16, int/float32, int/float64.
	  -v [{DEBUG,INFO,WARNING,ERROR}]
	                        Produces verbose output depending on the provided level. 
	                        Default level is warning, default when using -v is info.
	  -f                    Force overwriting of the output files.
	
	2.2.2